Structure of PDB 2hlh Chain A Binding Site BS03

Receptor Information
>2hlh Chain A (length=286) Species: 133505 (Bradyrhizobium sp. WM9) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TKERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVIDWRGSCYVEQPFS
NAFPAFFEPVEDIAGVPVICDDRVNQLSFPGPFFPRWWNRPSIDCINRPD
EQIFRERDELTELFQAREDSEANTIVCDACLMWRCSEEAERLIFRNIKLR
SEIRARIDALYEEHFSGHSIIGVHVRHDSELALHQVCMAIRKAKALSYPK
PVKVFLCTDSAQVLDQVSGLFPDVFAVPKAEMGIEGGASALIDMYLLARC
ATVIRFPPTSAFTRYARLLVPRIIEFDGHLTMIDNP
Ligand information
Ligand IDPO4
InChIInChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3
InChIKeyNBIIXXVUZAFLBC-UHFFFAOYSA-K
SMILES
SoftwareSMILES
CACTVS 3.341[O-][P]([O-])([O-])=O
ACDLabs 10.04[O-]P([O-])([O-])=O
OpenEye OEToolkits 1.5.0[O-]P(=O)([O-])[O-]
FormulaO4 P
NamePHOSPHATE ION
ChEMBL
DrugBankDB14523
ZINC
PDB chain2hlh Chain A Residue 333 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2hlh High-resolution structure of NodZ fucosyltransferase involved in the biosynthesis of the nodulation factor.
Resolution1.95 Å
Binding residue
(original residue number in PDB)
G14 G16 D17 R177 F289
Binding residue
(residue number reindexed from 1)
G13 G15 D16 R176 F262
Annotation score3
Enzymatic activity
Enzyme Commision number 2.4.1.-
Gene Ontology
Molecular Function
GO:0016757 glycosyltransferase activity
GO:0016758 hexosyltransferase activity
Biological Process
GO:0009312 oligosaccharide biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:2hlh, PDBe:2hlh, PDBj:2hlh
PDBsum2hlh
PubMed17762900
UniProtQ9AQ17

[Back to BioLiP]