Structure of PDB 2fmy Chain A Binding Site BS03

Receptor Information
>2fmy Chain A (length=218) Species: 129958 (Carboxydothermus hydrogenoformans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ATQMRLTDTNLLEVLNSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFL
VKSGRVRVYLAYEDKEFTLAILEAGDIFCTHTRAFIQAMEDTTILYTDIR
NFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQA
AMDTGLKVPQGIKLELGLNTEEIALMLGTTRQTVSVLLNDFKKMGILERV
NQRTLLLKDLQKLKEFSS
Ligand information
Ligand IDIMD
InChIInChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5)/p+1
InChIKeyRAXXELZNTBOGNW-UHFFFAOYSA-O
SMILES
SoftwareSMILES
CACTVS 3.341[nH]1cc[nH+]c1
ACDLabs 10.04c1c[nH+]cn1
OpenEye OEToolkits 1.5.0c1c[nH+]c[nH]1
FormulaC3 H5 N2
NameIMIDAZOLE
ChEMBL
DrugBank
ZINC
PDB chain2fmy Chain B Residue 1301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2fmy Crystal Structure of CO-sensing Transcription Activator CooA Bound to Exogenous Ligand Imidazole
Resolution2.2 Å
Binding residue
(original residue number in PDB)		M5 V118
Binding residue
(residue number reindexed from 1)		M4 V117
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:2fmy, PDBe:2fmy, PDBj:2fmy
PDBsum2fmy
PubMed17292914
UniProtQ3AB29

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