Structure of PDB 1sbe Chain A Binding Site BS03

Receptor Information
>1sbe Chain A (length=231) Species: 3847 (Glycine max) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGR
ALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTK
PQTHAGYLGLFNENEQVVAVEFDTFRNSWDPPNPHIGINVNSIRSIKTTS
WDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEW
VRIGFSAATGLDIPGESHDVLSWSFASNLPH
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain1sbe Chain A Residue 541 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1sbe X-ray crystallographic studies of unique cross-linked lattices between four isomeric biantennary oligosaccharides and soybean agglutinin.
Resolution2.8 Å
Binding residue
(original residue number in PDB)		D126 F128 N130 D133
Binding residue
(residue number reindexed from 1)		D123 F125 N127 D130
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding

View graph for
Molecular Function
External links
PDB RCSB:1sbe, PDBe:1sbe, PDBj:1sbe
PDBsum1sbe
PubMed9398234
UniProtP05046|LEC_SOYBN Lectin (Gene Name=LE1)

[Back to BioLiP]