Structure of PDB 1olp Chain A Binding Site BS03
Receptor Information
>1olp Chain A (length=370) Species:
29369
(Clostridium sardiniense) [
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WDGKEDGTGTHSVIVTQAIEMLKHDLSKDEPEAIRNDLSILEKNLHKFQL
GSTFPDYDPNAYSLYQDHFWDPDTDHNFTQDNKWYLSYAVPDNAESQTRK
FATLAKNEWDKGNYEKAAWYLGQGMHYFGDLNTPYHAANVTAVDSPGHVK
FETYAEERKDTYRLDTTGYNTDDAFYKDTLKNDNFNEWSKGYCKYWAKKA
KNLYYSHATMSNSWDDWEYAASHGVGNAQKGVAGYLYRFLNDVSNKDAVD
KDYDLNEIVVMIKTADVQDAGTDNYIYFGIETKDGVKEEWALDNPGNDFT
RNQEGTYTLKLKNKNTKYSDIKNMWIRDEKLTVATDGWKPSYVKVIAGDK
VRLEKNINEWISGGTTYTLK
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
1olp Chain A Residue 1373 [
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Receptor-Ligand Complex Structure
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PDB
1olp
Clostridium Absonum Alpha-Toxin: New Insights Into Clostridial Phospholipase C Substrate Binding and Specificity
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
W1 H11 D130
Binding residue
(residue number reindexed from 1)
W1 H11 D130
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
H11 D56 H68 H126 D130 H136 H148 E152
Catalytic site (residue number reindexed from 1)
H11 D56 H68 H126 D130 H136 H148 E152
Enzyme Commision number
3.1.4.3
: phospholipase C.
Gene Ontology
Molecular Function
GO:0004629
phospholipase C activity
GO:0008270
zinc ion binding
GO:0016787
hydrolase activity
GO:0016788
hydrolase activity, acting on ester bonds
GO:0034480
phosphatidylcholine phospholipase C activity
GO:0046872
metal ion binding
GO:0090729
toxin activity
Biological Process
GO:0031640
killing of cells of another organism
GO:0035821
modulation of process of another organism
Cellular Component
GO:0005576
extracellular region
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1olp
,
PDBe:1olp
,
PDBj:1olp
PDBsum
1olp
PubMed
14568535
UniProt
Q8GCY3
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