Structure of PDB 1m6x Chain A Binding Site BS03
Receptor Information
>1m6x Chain A (length=399) Species:
4932
(Saccharomyces cerevisiae) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SQFDILCKTPPKVLVRQFVERFERPSGEKIASCAAELTYLCWMITHNGTA
IKRATFMSYNTIISNSLSFDIVNKSLQFKYKTQKATILEASLKKLIPAWE
FTIIPYNGSDITDIVSSLQLQFESGNSHSKKMLKALLSEGESIWEITEKI
LNSFEYTSRFTKTKTLYQFLFLATFINCGRFSDIKNVDPKSFKLVQNKYL
GVIIQCLVTETKTSVSRHIYFFSARGRIDPLVYLDEFLRNSEPVLKRVNR
TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYPIFAIKNGPKSHIGRHLM
TSFLSMKGLTELTNVVGNWSDKQITAIPDHYFALVSRYYAYDPISKEMIA
LKDETNPIEEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRR
Ligand information
>1m6x Chain H (length=33) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
taagttcctattctttaaaagaataggaacttc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1m6x
Structural Plasticity of the Flp-Holliday Junction Complex
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
H47 K53 A55 T56 Y60 K82 N108 R191 F192 S193 K223 R281 N284 K299 N300 K303 S304 H305
Binding residue
(residue number reindexed from 1)
H46 K52 A54 T55 Y59 K81 N107 R180 F181 S182 K212 R270 N273 K288 N289 K292 S293 H294
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003690
double-stranded DNA binding
GO:0003697
single-stranded DNA binding
GO:0008301
DNA binding, bending
GO:0009009
site-specific recombinase activity
Biological Process
GO:0006310
DNA recombination
GO:0015074
DNA integration
GO:0042150
plasmid recombination
Cellular Component
GO:0005575
cellular_component
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1m6x
,
PDBe:1m6x
,
PDBj:1m6x
PDBsum
1m6x
PubMed
12559911
UniProt
P03870
|FLP_YEAST Site-specific recombinase Flp (Gene Name=FLP1)
[
Back to BioLiP
]