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Receptor Information

>1lod Chain A (length=180) Species: 3858 (Lathyrus ochrus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

TETTSFSITKFGPDQQNLIFQGDGYTTKERLTLTKAVRNTVGRALYSSPI
HIWDSKTGNVANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGGGY
LGVFNSKDYDKTSQTVAVEFDTFYNTAWDPSNGDRHIGIDVNSIKSINTK
SWALQNGKEANVVIAFNAATNVLTVSLTYP

Ligand ID

MUR

InChI

InChI=1S/C9H17NO7/c1-3(8(13)14)16-7-5(10)9(15)17-4(2-11)6(7)12/h3-7,9,11-12,15H,2,10H2,1H3,(H,13,14)/t3-,4-,5-,6-,7-,9-/m1/s1

InChIKey

MSFSPUZXLOGKHJ-KTZFPWNASA-N

SMILES

Software	SMILES
OpenEye OEToolkits 1.5.0	CC(C(=O)O)OC1C(C(OC(C1O)CO)O)N
OpenEye OEToolkits 1.5.0	C[C@H](C(=O)O)O[C@@H]1[C@H]([C@@H](O[C@@H]([C@H]1O)CO)O)N
CACTVS 3.341	C[C@@H](O[C@@H]1[C@@H](N)[C@H](O)O[C@H](CO)[C@H]1O)C(O)=O
CACTVS 3.341	C[CH](O[CH]1[CH](N)[CH](O)O[CH](CO)[CH]1O)C(O)=O
ACDLabs 10.04	O=C(O)C(OC1C(O)C(OC(O)C1N)CO)C

Formula

C9 H17 N O7

Name

beta-muramic acid;
muramic acid

PDB chain

1lod Chain A Residue 230 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	1lod Interaction of a legume lectin with two components of the bacterial cell wall. A crystallographic study.
Resolution	2.05 Å
Binding residue (original residue number in PDB)	A80 D81 G99 Y100 F123 N125
Binding residue (residue number reindexed from 1)	A80 D81 G99 Y100 F123 N125
Annotation score	1

Enzyme Commision number

	Molecular Function
GO:0005515	protein binding
GO:0005537	D-mannose binding
GO:0030246	carbohydrate binding
GO:0046872	metal ion binding

PDB	RCSB:1lod, PDBe:1lod, PDBj:1lod
PDBsum	1lod
PubMed	8144527
UniProt	P04122\|LECB_LATOC Lectin beta-1 and beta-2 chains

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Structure of PDB 1lod Chain A Binding Site BS03