Structure of PDB 1lkp Chain A Binding Site BS03
Receptor Information
>1lkp Chain A (length=190) Species:
881
(Nitratidesulfovibrio vulgaris) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KSLKGSRTEKNILTAFAGESQARNRYNYFGGQAKKDGFVQISDIFAETAD
QEREHAKRLFKFLEGGDLEIVAAFPAGIIADTHANLIASAAGEHHEYTEM
YPSFARIAREEGYEEIARVFASIAVAEEFHEKRFLDFARNIKEGRVFLRE
QATKWRCRNCGYVHEGTGAPELCPACAHPKAHFELLGINW
Ligand information
Ligand ID
FE2
InChI
InChI=1S/Fe/q+2
InChIKey
CWYNVVGOOAEACU-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Fe+2]
CACTVS 3.341
[Fe++]
Formula
Fe
Name
FE (II) ION
ChEMBL
DrugBank
DB14510
ZINC
PDB chain
1lkp Chain A Residue 600 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1lkp
X-ray Crystal Structures of Reduced Rubrerythrin and its Azide Adduct: A Structure-Based Mechanism for a Non-Heme Diiron Peroxidase
Resolution
1.64 Å
Binding residue
(original residue number in PDB)
E53 E94 E128 H131
Binding residue
(residue number reindexed from 1)
E52 E93 E127 H130
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005506
iron ion binding
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
Cellular Component
GO:0005575
cellular_component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:1lkp
,
PDBe:1lkp
,
PDBj:1lkp
PDBsum
1lkp
PubMed
12175244
UniProt
P24931
|RUBY_NITV2 Rubrerythrin (Gene Name=rbr)
[
Back to BioLiP
]