Structure of PDB 1i80 Chain A Binding Site BS03

Receptor Information
>1i80 Chain A (length=266) Species: 1773 (Mycobacterium tuberculosis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DPRPDPDELARRAAQVIADRTGIGEHDVAVVLGSGWLPAVAALGSPTTVL
PQAELPGFVPPTAAGHAGELLSVPIGAHRVLVLAGRIHAYEGHDLRYVVH
PVRAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLNLTARSPLVGGE
FVDLTDAYSPRLRELARQSDPQLAEGVYAGLPGPHYETPAEIRMLQTLGA
DLVGMSTVHETIAARAAGAEVLGVSLVTNLAAGITGEPLSHAEVLAAGAA
SATRMGALLADVIARF
Ligand information
Ligand IDIMR
InChIInChI=1S/C5H11NO3/c7-2-3-5(9)4(8)1-6-3/h3-9H,1-2H2/t3-,4+,5-/m1/s1
InChIKeyOQEBIHBLFRADNM-MROZADKFSA-N
SMILES
SoftwareSMILES
CACTVS 3.341OC[C@H]1NC[C@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0C1[C@@H]([C@@H]([C@H](N1)CO)O)O
OpenEye OEToolkits 1.5.0C1C(C(C(N1)CO)O)O
ACDLabs 10.04OCC1NCC(O)C1O
CACTVS 3.341OC[CH]1NC[CH](O)[CH]1O
FormulaC5 H11 N O3
NameIMINORIBITOL;
2-HYDROXYMETHYL-PYRROLIDINE-3,4-DIOL
ChEMBLCHEMBL261634
DrugBank
ZINCZINC000001492232
PDB chain1i80 Chain A Residue 351 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1i80 Structures of purine nucleoside phosphorylase from Mycobacterium tuberculosis in complexes with immucillin-H and its pieces.
Resolution2.0 Å
Binding residue
(original residue number in PDB)		S36 Y92 Y188 M207 H243
Binding residue
(residue number reindexed from 1)		S34 Y90 Y186 M205 H241
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) S36 H68 H90 Y92 E93 A120 M207 S208 N231 A233 H243
Catalytic site (residue number reindexed from 1) S34 H66 H88 Y90 E91 A118 M205 S206 N229 A231 H241
Enzyme Commision number 2.4.2.1: purine-nucleoside phosphorylase.
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004731 purine-nucleoside phosphorylase activity
GO:0016757 glycosyltransferase activity
GO:0016763 pentosyltransferase activity
Biological Process
GO:0006139 nucleobase-containing compound metabolic process
GO:0006154 adenosine catabolic process
GO:0006161 deoxyguanosine catabolic process
GO:0009116 nucleoside metabolic process
Cellular Component
GO:0005737 cytoplasm

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Biological Process
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Cellular Component
External links
PDB RCSB:1i80, PDBe:1i80, PDBj:1i80
PDBsum1i80
PubMed11444966
UniProtP9WP01|PUNA_MYCTU Purine nucleoside phosphorylase (Gene Name=punA)

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