Structure of PDB 8buu Chain 9 Binding Site BS03

Receptor Information
>8buu Chain 9 (length=573) Species: 220686 (Neobacillus vireti) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KNQRTIVKVSGLEKSFHLRKVLQNLHFEIKNGDRIGLVGYNGTGKTTLAN
IIFGKITPDNGLIEKSRDLRMGYLSQSIDYEVSHFQQSIAEVEEHELFQH
ASSLGLNKVFDWSEDRLTHLSGGEKLKLALSMVWATKPDFLILDQPTNHL
DFTGINWLVSELEKFHGPVLIISHDRHFLDKTVNRIFELEESRIQFFNGN
YSDYRIEKEQRIANQRHQYQVQQRQIEKIETQMVQLKSWSEKAHRDSTKQ
GSASERRQIGFKEYHRVKAKKLDNQVKSKMKRLQNELNKHKLEKPNEEAA
VRFQFDSHGKRGKRIIEAKKLTKMFDDRILFQDSPFYINHGDRIGLLGEN
GCGKTTLIKMILGDDLSFVGELWKSDSVKIAYLSQDVADLSADKTAIEAL
GFTDRESILKARTLLANLGLKEQLITKPIGTLSLGERTRVKLVDMLMKEY
DVLILDQPTNHLDLPSREQLEQTLSEFTGTIITVSHDHYFLNKLCDRLLV
FENQQIKRFEMKPQEYLNKDVKSGDRSEEAMLIIENKIALILGELSLIDQ
NNPKYYRLDEEFNELLKQKRNLK
Ligand information
>8buu Chain a (length=1538) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggagaguuugauccuggcucaggacgaacgcuggcggcgugccuaauaca
ugcaagucgagcggacagaugggagcuugcucccugauguuagcggcgga
cgggugaguaacacguggguaaccugccuguaagacugggauaacuccgg
gaaaccggggcuaauaccggaugguuguuugaaccgcaugguucaaacau
aaaagguggcuucggcuaccacuuacagauggacccgcggcgcauuagcu
aguuggugagguaacggcucaccaaggcgacgaugcguagccgaccugag
agggugaucggccacacugggacugagacacggcccagacuccuacggga
ggcagcaguagggaaucuuccgcaauggacgaaagucugacggagcaacg
ccgcgugagugaugaagguuuucggaucguaaagcucuguuguuagggaa
gaacaaguaccguucgaauagggcgguaccuugacgguaccuaaccagaa
agccacggcuaacuacgugccagcagccgcgguaauacguagguggcaag
cguuguccggaauuauugggcguaaagggcucgcaggcgguuucuuaagu
cugaugugaaagcccccggcucaaccggggagggucauuggaaacugggg
aacuugagugcagaagaggagaguggaauuccacguguagcggugaaaug
cguagagauguggaggaacaccaguggcgaaggcgacucucuggucugua
acugacgcugaggagcgaaagcguggggagcgaacaggauuagauacccu
gguaguccacgccguaaacgaugagugcuaaguguuaggggguuuccgcc
ccuuagugcugcagcuaacgcauuaagcacuccgccuggggaguacgguc
gcaagacugaaacucaaaggaauugacgggggcccgcacaagcgguggag
caugugguuuaauucgaagcaacgcgaagaaccuuaccaggucuugacau
ccucugacaauccuagagauaggacgucccggggcagagugacagguggu
gcaugguugucgucagcucgugucgugagauguuggguuaagucccgcaa
cgagcgcaacccuugaucuuaguugccagcauucaguugggcacucuaag
gugacugccggugacaaaccggaggaagguggggaugacgucaaaucauc
augccccuuaugaccugggcuacacacgugcuacaauggacagaacaaag
ggcagcgaaaccgcgagguuaagccaaucccacaaaucuguucucaguuc
ggaucgcagucugcaacucgacugcgugaagcuggaaucgcuaguaaucg
cggaucagcaugccgcggugaauacguucccgggccuuguacacaccgcc
cgucacaccacgagaguuuguaacacccgaagucggugagguaaccuuuu
aggagccagccgccgaaggugggacagaugauuggggugaagucguaaca
agguagccguaucggaaggugcggcuggaucaccuccu
...<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....<<<.
<<<..<<<..<<.<<<<...<<<..<..>..>>>...>>>>.>>>>>...
...<<........<<<<<<<..<<...<<<<<<<.<<<<.....<<<<<<
....>>>>>>......>>>>.....<<<<<<<<<<....>>>>>>>>>>.
....<<<<<<....>>>>>>.>>>>>>>..>>>>>>>>>.<<<....<<<
..<<<<<<<<.......>>>>>>>>>>>......>>>..<<<<<<<<...
.>>>>...>>>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>
>...>>>>>>.........<<<....<<<<....>>>>..>>>..>>.>>
>>>>..<<<<......<<<<....>>>>.....>>>>...<<<<<<<...
......<<<<<<<<<.....>>>>>>>>>..........>>>>>>...>.
.<<<<<(((...<<<<<.....<<.)))>>.......>>>>>>>>>>..>
>>>>>>>>..........<<<((.....<<<<...<<<.<<<<<<<.<<<
<<<<<<.......<<<<<<.....>>>>>>.....>>>>>>>..>>>>>>
>>>...<<<<<<<<...<<<<<<<....<<<<<<<<...<<<......>>
>......>>>>>>>>...........<<....>>.>>>>>>>..>>>>>.
>>>...>>>...>>>>....<<<<<<...<<...<<<<.<.....>.>>>
>...>>>>>>>>..........<<<<<<..<<<<<<<<<<<<......>>
>>>>>>>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<
....>>>>....>>>..)))).]<<<<<.<<<<<<<.<<.<<<<<<..<<
<<<<<<<<......<<........>>..........<<<<<<<......<
<<<<<<....<<<<<....>>>>>...<<<.>>>>>>>>.>>.<<<.<<<
..<<<<<<.......<<<<<<<<<....>>>..<<<<......>>>>..>
>>>>>.....<<<<.<<<<<<<..<<<..<<......>>>>>...>>>>>
>>.....<<<<<.....>>>>>........>>>>.........>>>...>
>>>>>>>>...>>>>>>>...>>.>>>>>>>>.....<<<<<<<.....<
<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>......<
....<<<<<<<........>>>>>>>....>.....>>>>>>....<<<<
<<<.........>>>>>>>......>>...>>>>>>>>>>.>>....<..
<<.<.<<<<.<<<..<<<<<<..<<<<....<.<<<<..<<<..<<<...
>>>.>>>.>>>>.>...>>>>..>>>>>>..>>>.>>>>..>.>>...>.
....<<<<<<<<<....>>>>>>>>>............
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8buu Genome-encoded ABCF factors implicated in intrinsic antibiotic resistance in Gram-positive bacteria: VmlR2, Ard1 and CplR.
Resolution2.9 Å
Binding residue
(original residue number in PDB)		K312 R313 R316 W375 S377 S379
Binding residue
(residue number reindexed from 1)		K310 R311 R314 W373 S375 S377
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity

View graph for
Molecular Function
External links
PDB RCSB:8buu, PDBe:8buu, PDBj:8buu
PDBsum8buu
PubMed36951104
UniProtW1SM44

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