Structure of PDB 6zm5 Chain 8 Binding Site BS03

Receptor Information
>6zm5 Chain 8 (length=157) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLD
KARERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEA
LEELQLESPKLHAEAIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRYNDIT
KVYTQVE
Ligand information
>6zm5 Chain x (length=70) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uagggaauaguuuaaaaaacagcugacuuucaaucagcagauggagguuc
aauuccuccuucccuaacca
<<<<<<<..<<<<...>>>>.<<<<<.......>>>>>....<<<<<...
....>>>>>>>>>>>>....
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6zm5 Mechanism of membrane-tethered mitochondrial protein synthesis.
Resolution2.89 Å
Binding residue
(original residue number in PDB)		R67 R70 K77
Binding residue
(residue number reindexed from 1)		R21 R24 K31
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
Biological Process
GO:0009653 anatomical structure morphogenesis
GO:0032543 mitochondrial translation
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005761 mitochondrial ribosome
GO:0005762 mitochondrial large ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6zm5, PDBe:6zm5, PDBj:6zm5
PDBsum6zm5
PubMed33602856
UniProtQ9NQ50|RM40_HUMAN Large ribosomal subunit protein mL40 (Gene Name=MRPL40)

[Back to BioLiP]