Structure of PDB 1rtm Chain 3 Binding Site BS03

Receptor Information
>1rtm Chain 3 (length=149) Species: 10116 (Rattus norvegicus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AIEVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTNHERMPFS
KVKALCSELRGTVAIPRNAEENKAIQEVAKTSAFLGITDEVTEGQFMYVT
GGRLTYSNWKKDEPNDHGSGEDCVTIVDNGLWNDISCQASHTAVCEFPA
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain1rtm Chain 3 Residue 3 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1rtm Trimeric structure of a C-type mannose-binding protein.
Resolution1.8 Å
Binding residue
(original residue number in PDB)		E165 D194
Binding residue
(residue number reindexed from 1)		E93 D122
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:1rtm, PDBe:1rtm, PDBj:1rtm
PDBsum1rtm
PubMed7704532
UniProtP19999|MBL1_RAT Mannose-binding protein A (Gene Name=Mbl1)

[Back to BioLiP]