Structure of PDB 7arb Chain z Binding Site BS02

Receptor Information
>7arb Chain z (length=233) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GTLGRAFYSVGFWIRETGQALDRLGCRLQGKNYFREQLSRHRTLMNVFDK
APIVDKEAFVAPSASVIGDVHIGRGSSIWYGCVLRGDVNTVSVGSGTNIQ
DNSLVHVAKSNLSGKVHPTIIGDNVTIGHSAVLHGCTVEDETFIGMGATL
LDGVVVEKHGMVAAGALVRQNTRIPSGEVWGGNPARFLRKLTDEEIAFIS
QSATNYSNLAQAHAAENAKPLNVIEFEKVLRKK
Ligand information
Ligand IDPSF
InChIInChI=1S/C18H34NO10P/c1-3-5-7-9-16(20)26-11-14(29-17(21)10-8-6-4-2)12-27-30(24,25)28-13-15(19)18(22)23/h14-15H,3-13,19H2,1-2H3,(H,22,23)(H,24,25)/t14-,15+/m1/s1
InChIKeyMIQYPPGTNIFAPO-CABCVRRESA-N
SMILES
SoftwareSMILES
CACTVS 3.341CCCCCC(=O)OC[C@H](CO[P@](O)(=O)OC[C@H](N)C(O)=O)OC(=O)CCCCC
OpenEye OEToolkits 1.5.0CCCCCC(=O)OCC(COP(=O)(O)OCC(C(=O)O)N)OC(=O)CCCCC
CACTVS 3.341CCCCCC(=O)OC[CH](CO[P](O)(=O)OC[CH](N)C(O)=O)OC(=O)CCCCC
OpenEye OEToolkits 1.5.0CCCCCC(=O)OCC(CO[P@@](=O)(O)OC[C@@H](C(=O)O)N)OC(=O)CCCCC
ACDLabs 10.04O=C(OC(COP(=O)(OCC(C(=O)O)N)O)COC(=O)CCCCC)CCCCC
FormulaC18 H34 N O10 P
Name1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE;
PHOSPHATIDYLSERINE
ChEMBL
DrugBank
ZINC
PDB chain7arb Chain z Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7arb A ferredoxin bridge connects the two arms of plant mitochondrial complex I.
Resolution3.41 Å
Binding residue
(original residue number in PDB)
L22 R24 R28
Binding residue
(residue number reindexed from 1)
L21 R23 R27
Annotation score1
Enzymatic activity
Enzyme Commision number 4.2.1.-
Gene Ontology
Molecular Function
GO:0004089 carbonate dehydratase activity
GO:0016829 lyase activity
GO:0046872 metal ion binding
Biological Process
GO:0009853 photorespiration
GO:0070207 protein homotrimerization
Cellular Component
GO:0005634 nucleus
GO:0005739 mitochondrion
GO:0016020 membrane
GO:0031966 mitochondrial membrane
GO:0045271 respiratory chain complex I

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:7arb, PDBe:7arb, PDBj:7arb
PDBsum7arb
PubMed33768254
UniProtQ9FWR5|GCA1_ARATH Gamma carbonic anhydrase 1, mitochondrial (Gene Name=GAMMACA1)

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