Structure of PDB 8upr Chain x Binding Site BS02

Receptor Information
>8upr Chain x (length=116) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAA
STVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHG
RVQALADAAREAGLQF
Ligand information
>8upr Chain d (length=120) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ugccuggcggccguagcgcgguggucccaccugaccccaugccgaacuca
gaagugaaacgccguagcgccgaugguaguguggggucuccccaugcgag
aguagggaacugccaggcau
<<<<<<<<<<.....<<<<<<<<....<<<<<<<.............>>>
>..>>>...>>>>>>.>>.<<.......<<<<<<<<...>>>>>>>>...
....>>...>>>>>>>>>>.
Receptor-Ligand Complex Structure
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PDB8upr Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Resolution5.3 Å
Binding residue
(original residue number in PDB)		K3 R15 R25 H29 R30 T31 P32 R33 H34 Q38 I40 G44 S45 E46 V47 K56 K63 Y64 N67 K68 H100 R102
Binding residue
(residue number reindexed from 1)		K2 R14 R24 H28 R29 T30 P31 R32 H33 Q37 I39 G43 S44 E45 V46 K55 K62 Y63 N66 K67 H99 R101
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