Structure of PDB 6m62 Chain v Binding Site BS02

Receptor Information
>6m62 Chain v (length=245) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NARAKRALVKREAKLVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMK
RFNRKNDIHPFEDMSPLEFFSEKNDCSLMVLMTSSKKRKNNMTFIRTFGY
KIYDMIELMVADNFKLLSDFKKLTFTVGLKPMFTFQGAAFDTHPVYKQIK
SLFLDFFRGESTDLQDVAGLQHVISMTIQGDFQDGEPLPNVLFRVYKLKS
YKSDQGGKRLPRIELVEIGPRLDFKIGRIHTPSPDMVTEAHKKPK
Ligand information
>6m62 Chain 3 (length=121) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gguugcggccauaucuaccagaaagcaccguuucccguccgaucaacugu
aguuaagcugguaagagccugaccgaguaguguagugggugaccauacgc
gaaacucaggugcugcaaucu
<<<<<<<<.....<<.<<<<<........<<..............>>...
.......>>>>>..>><<<<<<.......<<<....<......>...>>>
.....>>>>>>.>>>>>>>>.
Receptor-Ligand Complex Structure
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PDB6m62 Coupling of 5S RNP rotation with maturation of functional centers during large ribosomal subunit assembly.
Resolution3.2 Å
Binding residue
(original residue number in PDB)		Q36 H43 V47 K54 S93 K94 K95 R96 K130
Binding residue
(residue number reindexed from 1)		Q28 H35 V39 K46 S85 K86 K87 R88 K122
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0000470 maturation of LSU-rRNA
GO:0006364 rRNA processing

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Molecular Function
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Biological Process
External links
PDB RCSB:6m62, PDBe:6m62, PDBj:6m62
PDBsum6m62
PubMed32719344
UniProtP36160|RPF2_YEAST Ribosome biogenesis protein RPF2 (Gene Name=RPF2)

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