Structure of PDB 8esr Chain t Binding Site BS02
Receptor Information
>8esr Chain t (length=235) Species:
4896
(Schizosaccharomyces pombe) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PEVLLKKRKVNERTRKERVEQAIAKKEAQKKNRKETFKRAETFINNYRQR
ERERIRLNRSAKNKGDIFVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRL
SRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIYKRGFGKING
QRIALSDNALIEEALGKYDVISIEDIIHEIYNVGSHFKEVTKFLWPFTLT
PVKHSLMEKKVKHFNEGRKAGYCGEEINELIKKQV
Ligand information
>8esr Chain 2 (length=150) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aaaacuuucagcaacggaucucuuggcucucgcaucgaugaagaacgcag
cgaaaugcgauacguaaugugaauugcagaagaaucaucgaaucuuugaa
cgcacugcgccuuuggguucuaccaaaggcaugccuguuugagugucauu
..........................................<<<<<<.<
<.....>>>.....(.<<<......>>........>>>..)...>>>...
.<<...>><<<<<<<<......>>>>>>>>....................
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8esr
Chromatin localization of nucleophosmin organizes ribosome biogenesis.
Resolution
3.2 Å
Binding residue
(original residue number in PDB)
F51 R53
Binding residue
(residue number reindexed from 1)
F37 R39
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003674
molecular_function
GO:0003723
RNA binding
GO:0003735
structural constituent of ribosome
Biological Process
GO:0000463
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:1902626
assembly of large subunit precursor of preribosome
Cellular Component
GO:0005634
nucleus
GO:0005730
nucleolus
GO:0005737
cytoplasm
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:0030687
preribosome, large subunit precursor
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8esr
,
PDBe:8esr
,
PDBj:8esr
PDBsum
8esr
PubMed
36423630
UniProt
P17937
|RL7A_SCHPO Large ribosomal subunit protein uL30A (Gene Name=rlp7)
[
Back to BioLiP
]