Structure of PDB 7ph9 Chain o Binding Site BS02

Receptor Information
>7ph9 Chain o (length=115) Species: 272634 (Mycoplasmoides pneumoniae M129) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KINKQALIDLVEQKQLKAYVPEFSAGDEVNVAIKLKEKEKVRIQNFTGTV
LRRRGKGISETFIVRKTTDGIPIEKNFQIHNPNISIELKRRGKVRRAYIS
YMRERSGKAAKIKER
Ligand information
>7ph9 Chain 5 (length=1493) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ucugagaguuugauccuggcucaggauuaacgcuggcggcaugccuaaua
caugcaagucgaucgaaaguaguaauacuuuagaggcgaacgggugagua
acacguauccaaucuaccuuauaaugggggauaacuaguugaaagacuag
cuaauaccgcauaagaacuuugguucgaaucaaaguugaaaggaccugca
aggguucguuauuugaugagggugcgccauaucagcuaguugguggggua
acggccuaccaaggcaaugacguguagcuaugcugagaaguagaauagcc
acaaugggacugagacacggcccauacuccuacgggaggcagcaguaggg
aauuuuucacaaugagcgaaagcuugauggagcaaugccgcgugaacgau
gaaggucuuuaagauuguaaaguucuuuuauuugggaagaaugacuuuag
cagguaauggcuagaguuugacuguaccauuuugaauaagugacgacuaa
cuaugugccagcagucgcgguaauacauaggucgcaagcguuauccggau
uuauugggcguaaagcaagcgcaggcggauugaaaagucugguguuaaag
gcagcugcuuaacaguuguaugcauuggaaacuauuaaucuagagugugg
uagggaguuuuggaauuucauguggagcggugaaaugcguagauauauga
aggaacaccaguggcgaaggcgaaaacuuaggccauuacugacgcuuagg
cuugaaaguguggggagcaaauaggauuagauacccuaguaguccacacc
guaaacgauagauacuagcugucggggcgauccccucgguagugaaguua
acacauuaaguaucucgccuggguaguacauucgcaagaaugaaacucaa
acggaauugacggggacccgcacaagugguggagcauguugcuuaauucg
acgguacacgaaaaaccuuaccuagacuugacauccuuggcaaaguuaug
gaaacauaaugccgagugacagguggugcaugguugucgucagcucgugu
cgugagauguuggguuaagucccgcaacgagcgcaacccuuaucguuagu
uacauugucuagcgagacugcuaaugcaaauuggaggaaggaagggauga
cgucaaaucaucaugccccuuaugucuagggcugcaaacgugcuacaaug
gccaauacaaacagucgccagcuuguaaaagugagcaaaucuguaaaguu
ggucucaguucggauugagggcugcaauucguccucaugaagucggaauc
acuaguaaucgcgaaucagcuaugucgcggugaauacguucucgggucuu
guacacaccgcccgucaaacuaugaaagcugguaauauuuaaaaacgugu
ugcuaaccauuaggaagcgcaugucaaggauagcaccggugauuggaguu
aagucguaacaagguaccccuacgagaacguggggguggauca
.....<<<<..[.((([>.>>>.<<<..<<<<<..<<<<<<<<..<..<<
...<...<<<..<<.<<<<<<....>>>>>>.>>>>>......<<.....
...<<<.<<<..<<.......<<<<<.<<.....<<<<<......>>>>>
......>>.>.....<<<<<<<........>>>>>>>....<<<<<<...
.>>>>>>>>>>......>>>>>.>>>.<<.....<<<...<<<<<<<...
....>>>>>>>.>>>.......>>..<<<<<<<<....>>>...>>>>>.
>>.<<<<<............>>>>>.<<<<....>>>>....>..>>>..
......<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<...
.....<<.....>>.......>>>>...<<..<<<.........<<<<<<
<........>>>>>>>..........>>>...>>.....<<<<<(((...
<<<<<.....<..))).>.......>>>>>>>>>>..>>>>>.>>>....
......<<<((.....<<<<...<<<.<<<<<<..<<<<<<<<<<.....
<<<<<<<.....>>>>>>>..>>>>>>>>..>>.>>>>>>...<<<.<<<
<...<<<<<<<....<<<<<<.<<..<<<......>>>.....>>.>>>>
>.>..........<<....>>.>>>>>>>..>>>>..>>>...>>>...>
>>>....<<<<<<<...<...<<<<.........>>>>...>>>>>>>>.
.........<<<<<<..<<<<<<<<<<......>>>>>>>>>>...<<..
))>>.....>>>>>>.>>>.<<<.......<<<....>>>.....>>>..
].))).]<<<<<.<<<<<<<..<...<.<...<<<<<<<.........<<
........>>..........<<<<<<<......<<<<.........<<<<
....>>>>......>>.>>.<<<.<<....<<<<<.......<<<<<<<<
<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<..
.........>>>>>>.....<<<<<....>>>>>........>>>>....
.....>>>...>>..>>>>>...>>>>>>>.......>>>>>>>.....<
<<<<<......<<<..<<..<<<<....>>>>..>>....>>>.....>>
>>>>...........<<<<<<<........>>>>>>>...........>.
>.......<<<<<<..........>>>>>>.......>....>>>>>>>>
>>.>>.......<<.<.<<<<.<<<..<<<<<<..<<<<.....<<<<<.
<<<<..<<....>>.>>>>>>>>>....>>>>..>>>>>>..>>>.>>>>
..>.>>.........<<<<<<<<<....>>>>>>>>>......
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7ph9 Visualizing translation dynamics at atomic detail inside a bacterial cell.
Resolution8.7 Å
Binding residue
(original residue number in PDB)		S108 G109 K110
Binding residue
(residue number reindexed from 1)		S106 G107 K108
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7ph9, PDBe:7ph9, PDBj:7ph9
PDBsum7ph9
PubMed36171285
UniProtP75133|RL19_MYCPN Large ribosomal subunit protein bL19 (Gene Name=rplS)

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