Structure of PDB 6elz Chain m Binding Site BS02

Receptor Information
>6elz Chain m (length=645) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YSKYADGSDRIIKPEINPVYDSDDSDAETQNTIGNIPLSAYDEMPHIGYD
INGKRIMRPAKGSALDQLLDSIELPEGWTGLLDKNSGSSLNLTKEELELI
SKIQRNEQTDDSINPYEPLIDWFTRHEEVMPLTAVPEPKRRFVPSKNEAK
RVMKIVRAIREGRIIPPKKLKEMKEKEKIENYQYDLWGDSTETNDHVMHL
RAPKLPPPTNEESYNPPEEYLLSPEEKEAWENTEYSERERNFIPQKYSAL
RKVPGYGESIRERFERSLDLYLAPRVRKNKLNIDPNSLIPELPSPKDLRP
FPIRCSTIYAGHKGKVRTLSIDPSGLWLATGSDDGTVRVWEILTGREVYR
TTLIDDEENPDYHIECIEWNPDANNGILAVAVGENIHLIVPPIFGYDIEN
NGKTKIEDGFAQWNKPSQKQLEKDICITISCKKTVKKLSWHRKGDYFVTV
QPDSGNTSVLIHQVSKHLTQSPFKKSKGIIMDAKFHPFKPQLFVCSQRYV
RIYDLSQQILVKKLLPGARWLSKIDIHPRGDNLIASSFDKRVLWHDLDLA
STPYKTLRYHEKAVRSVNFHKKLPLFSSAADDGTIHVFHATVYDDMMKNP
MIVPLKKLTGHKVINSLGVLDAIWHPREAWLFSAGADNTARLWTT
Ligand information
>6elz Chain 2 (length=158) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagc
gaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcacauugcgccccuugguauuccagggggcaugccuguuugag
cgucauuu
.........................................<<<<<<.<<
.....>>>.....(.<<<......>>..............>>>..)...>
>>....<<.....>><<<<<<<<<....>>>>>>>>>.............
........
Receptor-Ligand Complex Structure
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PDB6elz Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Resolution3.3 Å
Binding residue
(original residue number in PDB)		M322 H323
Binding residue
(residue number reindexed from 1)		M198 H199
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0043021 ribonucleoprotein complex binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006364 rRNA processing
GO:0042254 ribosome biogenesis
GO:0042273 ribosomal large subunit biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0030687 preribosome, large subunit precursor
GO:0070545 PeBoW complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6elz, PDBe:6elz, PDBj:6elz
PDBsum6elz
PubMed29245012
UniProtQ04660|ERB1_YEAST Ribosome biogenesis protein ERB1 (Gene Name=ERB1)

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