Structure of PDB 7obr Chain l Binding Site BS02

Receptor Information
>7obr Chain l (length=50) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL
Ligand information
>7obr Chain 8 (length=156) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cgacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagc
uagcugcgagaauuaaugugaauugcaggacacauugaucaucgacacuu
cgaacgcacuugcggccccggguuccucccggggcuacgccugucugagc
gucgcu
.........................................<<<<<<.<<
.....>>>.....(.<<<......>>.............>>>..)...>>
>....<<<..>>><<<<<<<<.......>>>>>>>>..............
......
Receptor-Ligand Complex Structure
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PDB7obr Molecular mechanism of cargo recognition and handover by the mammalian signal recognition particle.
Resolution2.8 Å
Binding residue
(original residue number in PDB)		T6 F7 R8 R11 K15 K18 Q19 R21 P24 W26 I27 M29 K30 T31 K40
Binding residue
(residue number reindexed from 1)		T5 F6 R7 R10 K14 K17 Q18 R20 P23 W25 I26 M28 K29 T30 K39
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7obr, PDBe:7obr, PDBj:7obr
PDBsum7obr
PubMed34260909
UniProtG1SYU7|RL39_RABIT Large ribosomal subunit protein eL39 (Gene Name=RPL39)

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