Structure of PDB 8bpo Chain k2 Binding Site BS02

Receptor Information
>8bpo Chain k2 (length=50) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SSHKTFRIKRFLAKKQKQNRPIPQWIWMKTGNKIRYNSKRRHWRRTKLGL
Ligand information
>8bpo Chain C1 (length=151) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cgacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagc
uagcugcgagaauuaaugugaauugcagguugaucaucgacacuucgaac
gcacuugcggccccggguuccucccggggcuacgccugucugagcgucgc
u
.........................................<<<<<<<<<
....>>>>.....<.<<<......>>........>>>..>...>>>....
<<<..>>><<<<<<<<.......>>>>>>>>...................
.
Receptor-Ligand Complex Structure
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PDB8bpo Mechanism of ribosome-associated mRNA degradation during tubulin autoregulation.
Resolution2.8 Å
Binding residue
(original residue number in PDB)		R8 R11 K15 K18 Q19 R21 I23 P24 W26 I27 M29 K30 T31 I35 K40
Binding residue
(residue number reindexed from 1)		R7 R10 K14 K17 Q18 R20 I22 P23 W25 I26 M28 K29 T30 I34 K39
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:8bpo, PDBe:8bpo, PDBj:8bpo
PDBsum8bpo
PubMed37295431
UniProtG1TTN1

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