Structure of PDB 6yal Chain k Binding Site BS02

Receptor Information
>6yal Chain k (length=595) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISET
LCIGCGICIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPG
EVLGLVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQ
NYFTKILEDDLKAIIKPQYVDQIPKAAKGTVGSILDRKDETKTQAIVCQQ
LDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMFDEPSSYLDVKQRL
KAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVTMPF
SVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGM
KKKMGEFELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGE
VPVLNVSYKPQKISPKSTGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIEN
IIDQEVQTLSGGELQRVALALCLGKPADVYLIDEPSAYLDSEQRLMAARV
VKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPSKNTVANSPQTLLA
GMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLD
Ligand information
Ligand IDSF4
InChIInChI=1S/4Fe.4S
InChIKeyLJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
FormulaFe4 S4
NameIRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain6yal Chain k Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6yal Structural Insights into the Mammalian Late-Stage Initiation Complexes.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		A9 C29 I39 C55 G57 C58 C61
Binding residue
(residue number reindexed from 1)		A6 C26 I36 C52 G54 C55 C58
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
GO:0043024 ribosomal small subunit binding
Biological Process
GO:0000054 ribosomal subunit export from nucleus
GO:0006413 translational initiation
GO:0006415 translational termination

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Molecular Function
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Biological Process
External links
PDB RCSB:6yal, PDBe:6yal, PDBj:6yal
PDBsum6yal
PubMed
UniProtG1SG72

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