Structure of PDB 5oql Chain k Binding Site BS02

Receptor Information

>5oql Chain k (length=117) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

TLSDWYNIPRTNLTPELKRDLQLLRMRDVVAMGKQFFKKDNRKDFVPEYC
QVGTIIAGATDGVSGRLTRKERKRTIVEEVLSSDSVSKYKRKYHEIQEHK
KSGRKGYYKKLMAARKR

Ligand information

>5oql Chain 2 (length=230) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

agcgacaauacuucagagaaucauuucuauaguaguuguccucucuugug
uuuccuaaaggagccacagaucccacccggguugaugaacgagauccucg
gcgccagugagguccauuuacucucgcucuaccugcaaagguggcggucg
cgugccucgucucgcggcuguauagagaguggcgaugaucuguaccccgc
ggggugggugucgauggaagucugaccggc

..................................................
..........................<<<<..............<<<<<<
<<<<.<<............<<<<<<...<<<<<<....>>>>>><<<<<<
<<.<......>.>>>>>>>>....>>>>>>.........>>.<<<<<<..
>>>>>>.>>>>>>>.>>>.......>>>>.

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5oql 3.2- angstrom -resolution structure of the 90S preribosome before A1 pre-rRNA cleavage.
Resolution	3.2 Å
Binding residue (original residue number in PDB)	T153 R154
Binding residue (residue number reindexed from 1)	T68 R69

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003723	RNA binding

	Biological Process
GO:0006396	RNA processing

	Cellular Component
GO:0005634	nucleus
GO:0005730	nucleolus

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Molecular Function

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Cellular Component

External links

PDB	RCSB:5oql, PDBe:5oql, PDBj:5oql
PDBsum	5oql
PubMed	28967883
UniProt	G0S4E3

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