Structure of PDB 8p16 Chain h Binding Site BS02
Receptor Information
>8p16 Chain h (length=210) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS
VSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQI
NIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKV
EVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVW
IFKGEILGGM
Ligand information
>8p16 Chain 4 (length=26) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
uaaggagguauuaaaugugggaauuc
..........................
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8p16
The compensatory mechanism of a naturally evolved E167K RF2 counteracting the loss of RF1 in bacteria
Resolution
2.77 Å
Binding residue
(original residue number in PDB)
I162 R164
Binding residue
(residue number reindexed from 1)
I161 R163
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003729
mRNA binding
GO:0003735
structural constituent of ribosome
GO:0019843
rRNA binding
Biological Process
GO:0000028
ribosomal small subunit assembly
GO:0002181
cytoplasmic translation
GO:0006412
translation
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0005840
ribosome
GO:0022627
cytosolic small ribosomal subunit
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8p16
,
PDBe:8p16
,
PDBj:8p16
PDBsum
8p16
PubMed
UniProt
P0A7V3
|RS3_ECOLI Small ribosomal subunit protein uS3 (Gene Name=rpsC)
[
Back to BioLiP
]