Structure of PDB 8inf Chain g Binding Site BS02

Receptor Information
>8inf Chain g (length=143) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRK
SAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAV
KKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII
Ligand information
>8inf Chain 8 (length=154) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagcu
agcugcgagaauuaaugugaauugcaggacacauugaucaucgacacuuc
gaacgcacugcggccccggguuccucccggggcuacgccugucugagcgu
cgcu
........................................<<<<<<.<<.
....>>>.....(.<<<......>>.............>>>..)...>>>
....<<...>><<<<<<<<<.....>>>>>>>>>................
....
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8inf Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		V32 H33 P49 T51 L52 R56 K63 K70 H107 Q108
Binding residue
(residue number reindexed from 1)		V19 H20 P36 T38 L39 R43 K50 K57 H94 Q95
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0045296 cadherin binding
GO:1904841 TORC2 complex binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:0022626 cytosolic ribosome
GO:0070062 extracellular exosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8inf, PDBe:8inf, PDBj:8inf
PDBsum8inf
PubMed37491604
UniProtP62750|RL23A_HUMAN Large ribosomal subunit protein uL23 (Gene Name=RPL23A)

[Back to BioLiP]