Structure of PDB 7y41 Chain f Binding Site BS02

Receptor Information
>7y41 Chain f (length=37) Species: 246196 (Mycolicibacterium smegmatis MC2 155) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKVNPSVKPICDKCRVIRRHGRVMVICSDPRHKQRQG
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain7y41 Chain f Residue 101 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7y41 Cryo-EM structures reveal a unique conformational dynamics of the Mycobacterium 23S rRNA helices
Resolution4.1 Å
Binding residue
(original residue number in PDB)
C27 H32
Binding residue
(residue number reindexed from 1)
C27 H32
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:7y41, PDBe:7y41, PDBj:7y41
PDBsum7y41
PubMed37709237
UniProtA0QSL4|RL36_MYCS2 Large ribosomal subunit protein bL36 (Gene Name=rpmJ)

[Back to BioLiP]