Structure of PDB 5mei Chain d6 Binding Site BS02

Receptor Information
>5mei Chain d6 (length=97) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVR
DLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPP
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5mei Chain d6 Residue 102 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5mei Inhibition of Eukaryotic Translation by the Antitumor Natural Product Agelastatin A.
Resolution3.5 Å
Binding residue
(original residue number in PDB)
C23 C26 C77
Binding residue
(residue number reindexed from 1)
C22 C25 C76
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:5mei, PDBe:5mei, PDBj:5mei
PDBsum5mei
PubMed28457705
UniProtP39939|RS26B_YEAST Small ribosomal subunit protein eS26B (Gene Name=RPS26B)

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