Structure of PDB 7oya Chain d2 Binding Site BS02

Receptor Information
>7oya Chain d2 (length=49) Species: 7955 (Danio rerio) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YWSHPRKYGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVKL
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain7oya Chain d2 Residue 100 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7oya A molecular network of conserved factors keeps ribosomes dormant in the egg.
Resolution3.2 Å
Binding residue
(original residue number in PDB)		V23 C24
Binding residue
(residue number reindexed from 1)		V17 C18
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008270 zinc ion binding
Biological Process
GO:0001525 angiogenesis
GO:0001570 vasculogenesis
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0030218 erythrocyte differentiation
GO:0043009 chordate embryonic development
GO:0048821 erythrocyte development
GO:0051726 regulation of cell cycle
GO:0060218 hematopoietic stem cell differentiation
GO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator
Cellular Component
GO:0005791 rough endoplasmic reticulum
GO:0005840 ribosome
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7oya, PDBe:7oya, PDBj:7oya
PDBsum7oya
PubMed36653451
UniProtQ6Q419

[Back to BioLiP]