Structure of PDB 8jho Chain c Binding Site BS02

Receptor Information
>8jho Chain c (length=109) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTA
EILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPN
IQSVLLPKK
Ligand information
>8jho Chain J (length=340) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aatacatgcacaggatgtatatatctgacacgtgcctggagactagggag
taatccccttggcggttaaaacgcgggggacagcgcgtacgtgcgtttaa
gcggtgctagagctgtctacgaccaattgagcggcctcggcaccgggatt
ctccagtctagaactggcagtactttcaatacatgcacaggatgtatata
tctgacacgtgcctggagactagggagtaatccccttggcggttaaaacg
cgggggacagcgcgtacgtgcgtttaagcggtgctagagctgtctacgac
caattgagcggcctcggcaccgggattctcgatatcgaat
Receptor-Ligand Complex Structure
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PDB8jho Structure of histone deacetylase complex Rpd3S bound to nucleosome
Resolution7.6 Å
Binding residue
(original residue number in PDB)		R11 K13 R29 R42 V43 T76
Binding residue
(residue number reindexed from 1)		R1 K3 R19 R32 V33 T66
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:8jho, PDBe:8jho, PDBj:8jho
PDBsum8jho
PubMed37798513
UniProtP06897|H2A1_XENLA Histone H2A type 1

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