Structure of PDB 8jdk Chain c Binding Site BS02
Receptor Information
>8jdk Chain c (length=120) Species:
9606
(Homo sapiens) [
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KKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESA
MKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKA
YVRLAPDYDALDVANKIGII
Ligand information
>8jdk Chain F (length=156) [
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cgacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagc
uagcugcgagaauuaaugugaauugcaggacacauugaucaucgacacuu
cgaacgcacuugcggccccggguuccucccggggcuacgccugucugagc
gucgcu
.........................................<<<<<<.<<
.....>>>.....(.<<<.(....>>.........)...>>>..)...>>
>....<<....>><<<<<<<<<.....>>>>>>>>>..............
......
Receptor-Ligand Complex Structure
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PDB
8jdk
Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Resolution
2.26 Å
Binding residue
(original residue number in PDB)
P49 T51 L52 R56 K63 P66 R67 R68 N69 K70 Q108
Binding residue
(residue number reindexed from 1)
P13 T15 L16 R20 K27 P30 R31 R32 N33 K34 Q72
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
GO:0003735
structural constituent of ribosome
GO:0005515
protein binding
GO:0019843
rRNA binding
GO:0045296
cadherin binding
GO:1904841
TORC2 complex binding
Biological Process
GO:0000027
ribosomal large subunit assembly
GO:0002181
cytoplasmic translation
GO:0006412
translation
Cellular Component
GO:0005634
nucleus
GO:0005730
nucleolus
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:0022626
cytosolic ribosome
GO:0070062
extracellular exosome
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:8jdk
,
PDBe:8jdk
,
PDBj:8jdk
PDBsum
8jdk
PubMed
37992713
UniProt
P62750
|RL23A_HUMAN Large ribosomal subunit protein uL23 (Gene Name=RPL23A)
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