Structure of PDB 5vcb Chain c Binding Site BS02
Receptor Information
>5vcb Chain c (length=120) Species:
83333
(Escherichia coli K-12) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AILGLGTDIVEIARIEAVIARSGDRLARRVLSDNEWAIWKTHHQPVRFLA
KRFAVKEAAAKAFGGLAFNQFEVFNDELGKPRLRLWGEALKLAEKLGVAN
MHVTLADERHYACATVIIES
Ligand information
Ligand ID
PNS
InChI
InChI=1S/C11H23N2O7PS/c1-11(2,7-20-21(17,18)19)9(15)10(16)13-4-3-8(14)12-5-6-22/h9,15,22H,3-7H2,1-2H3,(H,12,14)(H,13,16)(H2,17,18,19)/t9-/m0/s1
InChIKey
JDMUPRLRUUMCTL-VIFPVBQESA-N
SMILES
Software
SMILES
CACTVS 3.341
CC(C)(CO[P](O)(O)=O)[C@@H](O)C(=O)NCCC(=O)NCCS
ACDLabs 10.04
O=C(NCCS)CCNC(=O)C(O)C(C)(C)COP(=O)(O)O
OpenEye OEToolkits 1.5.0
CC(C)(COP(=O)(O)O)C(C(=O)NCCC(=O)NCCS)O
OpenEye OEToolkits 1.5.0
CC(C)(COP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCS)O
CACTVS 3.341
CC(C)(CO[P](O)(O)=O)[CH](O)C(=O)NCCC(=O)NCCS
Formula
C11 H23 N2 O7 P S
Name
4'-PHOSPHOPANTETHEINE
ChEMBL
DrugBank
DB03912
ZINC
PDB chain
5vcb Chain e Residue 101 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5vcb
Structure, High Affinity, and Negative Cooperativity of the Escherichia coli Holo-(Acyl Carrier Protein):Holo-(Acyl Carrier Protein) Synthase Complex.
Resolution
4.1 Å
Binding residue
(original residue number in PDB)
A112 D113
Binding residue
(residue number reindexed from 1)
A106 D107
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.7.8.7
: holo-[acyl-carrier-protein] synthase.
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0008897
holo-[acyl-carrier-protein] synthase activity
GO:0016740
transferase activity
GO:0046872
metal ion binding
Biological Process
GO:0006633
fatty acid biosynthetic process
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5vcb
,
PDBe:5vcb
,
PDBj:5vcb
PDBsum
5vcb
PubMed
29054754
UniProt
P24224
|ACPS_ECOLI Holo-[acyl-carrier-protein] synthase (Gene Name=acpS)
[
Back to BioLiP
]