Structure of PDB 6w2s Chain b Binding Site BS02

Receptor Information
>6w2s Chain b (length=101) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVR
DISEVSVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF
R
Ligand information
>6w2s Chain 0 (length=339) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uucgauaccaagagcuggugucugagggauuacgacucgcguggucggac
agcacauguuagucauguauuaugguguuucccaacacguaucuuugcuc
uaguauugaacuuuagugaugaguguacuuggcauguacaccugauuagu
uagcccuuguggauacgccacugccgcucagguacaguaggacauacccc
aaauauuggguuuuuuuuuuagagaagaaaauuaguggcgaaacguacgg
uuuaugucaaaggagaaggugauuuuaauugcaccugaagcaacccuagg
ucuucccuuugaugugagcuaauaaggaguaaccgauuc
.<<<<<<<...<<<<.<<.......<<<<....<.<......>.>.....
.<.........................>.>>>>.........>>..>>>>
..>>>>>>>..............<.<...........>.>..........
..............<.<.....<<<..<........>..>>.>....<<<
<.....>>>>...>.>....................<<..........<<
<<<<<<<<<.<<....<<<..............>>>..............
.......>>>>>>>>>>>>>............>>.....
Receptor-Ligand Complex Structure
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PDB6w2s A complex IRES at the 5'-UTR of a viral mRNA assembles a functional 48S complex via an uAUG intermediate.
Resolution3.47 Å
Binding residue
(original residue number in PDB)		R42 N43 E46 R100 R102
Binding residue
(residue number reindexed from 1)		R41 N42 E45 R99 R101
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005783 endoplasmic reticulum
GO:0005791 rough endoplasmic reticulum
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6w2s, PDBe:6w2s, PDBj:6w2s
PDBsum6w2s
PubMed32286223
UniProtG1TFE8|RS26_RABIT Small ribosomal subunit protein eS26 (Gene Name=RPS26)

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