Structure of PDB 5gpn Chain b Binding Site BS02

Receptor Information
>5gpn Chain b (length=149) Species: 9823 (Sus scrofa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TELVRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEERC
IACKLCEAVCPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACP
VDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEIAANIQADYLYR
Ligand information
Ligand IDSF4
InChIInChI=1S/4Fe.4S
InChIKeyLJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
FormulaFe4 S4
NameIRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain5gpn Chain b Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5gpn The architecture of the mammalian respirasome.
Resolution5.4 Å
Binding residue
(original residue number in PDB)
H101 C123 C152 I153 Y154 C155 G156 F157 C158
Binding residue
(residue number reindexed from 1)
H38 C60 C89 I90 Y91 C92 G93 F94 C95
Annotation score4
Gene Ontology
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UnboundLocalError
Python 3.6.8: /usr/bin/python3
Fri Nov 29 13:09:56 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '5gpn', asym_id = 'b', bs = 'BS02', title = 'The architecture of the mammalian respirasome.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='5gpn', asym_id='b', bs='BS02', title='The architecture of the mammalian respirasome.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0016020,0016651,0051539', uniprot = '', pdbid = '5gpn', asym_id = 'b'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0016020,0016651,0051539', uniprot='', pdbid='5gpn', asym_id='b')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>