Structure of PDB 8peg Chain a Binding Site BS02

Receptor Information
>8peg Chain a (length=134) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDA
RKSDQNVRGATVLPHGTGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEA
LLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVD
Ligand information
>8peg Chain X (length=78) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggugagguggccgagaggcugaaggcgcuccccugcuaagggaguauauc
cgggguucgaauccccgccucaccgcca
.<<<<<<..<<<...........>>>.<<<<<.......>>>>>......
<<<<<.......>>>>>>>>>>>.....
Receptor-Ligand Complex Structure
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PDB8peg Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Resolution3.3 Å
Binding residue
(original residue number in PDB)		R53 K54 S55 R164 K167
Binding residue
(residue number reindexed from 1)		R51 K52 S53 R73 K76
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0006417 regulation of translation
GO:0045947 negative regulation of translational initiation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8peg, PDBe:8peg, PDBj:8peg
PDBsum8peg
PubMed38409277
UniProtP0A7L0|RL1_ECOLI Large ribosomal subunit protein uL1 (Gene Name=rplA)

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