Structure of PDB 8bvw Chain a Binding Site BS02
Receptor Information
>8bvw Chain a (length=97) Species:
8355
(Xenopus laevis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSS
AVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Ligand information
>8bvw Chain T (length=206) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
tcggatgtatatatctgacacgtgcctggagactagggagtaatcccctt
ggcggttaaaacgcgggggacagcgcgtacgtgcgtttaagcggtgctag
agctgtctacgaccaattgagcggcctcggcaccgggattctcgatcagc
gatgcggaagagagtgaggacgaacgcgcccccacccccttttatagccc
cccttc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8bvw
Structural basis of transcription reduction by a promoter-proximal +1 nucleosome.
Resolution
4.0 Å
Binding residue
(original residue number in PDB)
P39 R41 Y42 G45 V47 R50 R64 K65 L66 R70 R84
Binding residue
(residue number reindexed from 1)
P1 R3 Y4 G7 V9 R12 R26 K27 L28 R32 R46
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0030527
structural constituent of chromatin
GO:0046982
protein heterodimerization activity
Cellular Component
GO:0000786
nucleosome
GO:0005634
nucleus
GO:0005654
nucleoplasm
GO:0005694
chromosome
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:8bvw
,
PDBe:8bvw
,
PDBj:8bvw
PDBsum
8bvw
PubMed
37148879
UniProt
P84233
|H32_XENLA Histone H3.2
[
Back to BioLiP
]