Structure of PDB 7pkt Chain a Binding Site BS02

Receptor Information
>7pkt Chain a (length=263) Species: 3055 (Chlamydomonas reinhardtii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
APLPGLIYWKPSTPGTRHKISIDYAGLGVYTGPPHPELSAHVAKTGGRNN
TGRITTRHRGGGAPKVVRDVDFDRQRVDGLPGVVQRLEADPGRSGWLALV
KYSPEGQLPFYRYHLAPADVKAGDVLMSGHGAAIKPGNVLTLRDVPIGVP
IHNIELVPGRGGQLARAASTSAVVTSKQDTHAVVRLPSSETRLIDLSCRA
TVGQVSNHLQRSINHGKAGSRRNLGWRPSVRGIAMNPIDHPHGGKRTRRR
DASSNKFIITRAG
Ligand information
>7pkt Chain 7 (length=578) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaccguacugcaaaccgacucaggugggcuaguauauauacucaggccau
agaaucaaccauguuaaaggaacucggcaaaaugcacgcgugaccucgga
ggaagcguggcuaaaaagacucagcaaauagccgacagcgacuguuuacc
aaaaacacaggauagugcuaacagacguaaauuaagcugcaaaaagcggu
uuuauuuuuggauguauacuauccgacgccaaacggcggcaguaacucua
acuguccuaagguagcgaaauuccuugacuuguaauuggcguccugcaug
aauggcggaacgacugucgggcugucucuaacauggaaucugugaauuug
aaaucuucgugcagaugcgaaggcgcuggcaagggacgaagagacccuau
gcagcuucgcugggugcuaagaguuacucuuauccucaagcuuuucuggg
acggaugcuuccuaaauaguaacgggagugaucaaugguacugcuacuua
aauagaaagcagugcuugacuguaagaaccacaguucgagcagggacgca
agucggcauuaaugacccaggguaacau
..............<<......>>......<<<......>>>........
<<<.<...<<<<<<<<.<<...............<<<<<...........
....>>>>>.<<....>>.............<<<<<<<<<..<<<.....
....>>>..<<<<<<<.....<<......<<<.<<<<<<<.....>>>>>
>>.>>>..>>.......>>>>>>>..<<<........<<<.<........
..>>>>....................<<<...........>>>.......
....>>.>..>>.>>>>>>>.....>>.>>>>>>>>.>>>>.........
....<<<<<........>>>>>............................
........<<<..<.<.<<<<<<<.>>>>>>>..>.>.>>>...<<<...
..>>>.<<<<<<...........>>>>>>...<...<<<<<<<<..<<..
(((>>...>>>>>>>>...<<<<..<<<<....>>>>..>>>>.<<<...
.>>>.>.)))..................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7pkt How to build a ribosome from RNA fragments in Chlamydomonas mitochondria.
Resolution3.0 Å
Binding residue
(original residue number in PDB)
R85 H86 G115 N117 N118 T123 T124 R125 H126 R127 R161 R228 Q231 L232 A233 R234 A235 A236 S237 T238 L254 P255 S256 E258 R260 R279 N282 H283 A286 W294 P296 S297 V298 R299 G300 I301 P305 R332 T333 R334 R335 R336 D337 S339 S340 R347
Binding residue
(residue number reindexed from 1)
R17 H18 G47 N49 N50 T55 T56 R57 H58 R59 R93 R160 Q163 L164 A165 R166 A167 A168 S169 T170 L186 P187 S188 E190 R192 R211 N214 H215 A218 W226 P228 S229 V230 R231 G232 I233 P237 R246 T247 R248 R249 R250 D251 S253 S254 R261
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0016740 transferase activity
Biological Process
GO:0006412 translation
GO:0032543 mitochondrial translation
Cellular Component
GO:0005762 mitochondrial large ribosomal subunit
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:7pkt, PDBe:7pkt, PDBj:7pkt
PDBsum7pkt
PubMed34887394
UniProtA0A2K3DL58

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