Structure of PDB 6q97 Chain Z Binding Site BS02

Receptor Information
>6q97 Chain Z (length=56) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVSF
MVKVEE
Ligand information
>6q97 Chain 3 (length=120) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ugccuggcggccguagcgcgguggucccaccugaccccaugccgaacuca
gaagugaaacgccguagcgccgaugguaguguggggucuccccaugcgag
aguagggaacugccaggcau
<<<<<<<<<......<<<<<<<<....<<<<<<<.............>>>
>..>>>...>>>>>>.>>.<<.....<..<<<<<<<...>>>>>>>...>
....>>....>>>>>>>>>.
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6q97 How a circularized tmRNA moves through the ribosome.
Resolution3.9 Å
Binding residue
(original residue number in PDB)		R16 L17
Binding residue
(residue number reindexed from 1)		R13 L14
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6q97, PDBe:6q97, PDBj:6q97
PDBsum6q97
PubMed30765567
UniProtA0A0E0XV41

[Back to BioLiP]