Structure of PDB 8a3w Chain Y Binding Site BS02

Receptor Information
>8a3w Chain Y (length=132) Species: 347515 (Leishmania major strain Friedlin) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKK
VVRGMSKQTIARRSQVGVFLRVVNHKHFLPTRYNVDMSKELRGKINVSDA
SKRSRSKRLVRHVFQARYNAGSSMWFFQRLRF
Ligand information
>8a3w Chain 3 (length=153) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gugguaaugcggccagguaacaaaucaauccucccacggugagcuuucuu
uucaccauaauccaccuugggccuuuuuaccgcguuguucggagcggggg
cucaagauugaaaaaugcauugugaguucugcgcuaaagcaaaaaccugg
ggu
<<<....>>>..<<<<<<.......<<...<<<.<<.<<<<<<.......
>>>>>><...<<.<.<<<<<<<<<<<....<<.......>>....>>>>>
>>>>>>.>.>>....>....>>.>>>...>>.............>>>>>>
...
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8a3w CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : WILD TYPE
Resolution2.89 Å
Binding residue
(original residue number in PDB)
G16 R17 Y38 K47 R73 V74 N76 K78 H79 R131
Binding residue
(residue number reindexed from 1)
G14 R15 Y36 K45 R71 V72 N74 K76 H77 R129
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8a3w, PDBe:8a3w, PDBj:8a3w
PDBsum8a3w
PubMed
UniProtQ4Q504

[Back to BioLiP]