Structure of PDB 8a22 Chain Xd Binding Site BS02

Receptor Information
>8a22 Chain Xd (length=413) Species: 353565 (Polytomella magna) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YRNKVTIEYIKLKEPENDDYATRDPTNYAQLLGAISISRHLDRTTYLYET
FKDKFDTIHYVTALTKLPGLVHYRGADLVMRDGVQWSEGVKPFWQKPNAQ
PRKHLLPKAQGLLSKLEEQFPPHLNNLFPRQTANLIWAYGQLKRKQVVAA
CPFLGDFLLSLRRDNFLALDKHATGADYAQIVKGLANLQTAGSPADEDTR
ALIEDFVDQLTQEMLLRRGHARLLDAREAQSILWGLGKLNRRKNTAIIDV
LCDVVLAGVNSLTPTALAGAFSALAKLGHSSRTDVFEAMAKGYHLQTTLM
SPQDVSLTVCACADLGFRDDNLLKICGLKAADMLGEFSNASLAWLMAGFG
RLGYNHEAFFSAVNKSVLAEPVVEVEPGFAWRVLSAYAGSGRKDSESLKV
CGRITEAFLAKLY
Ligand information
>8a22 Chain A7 (length=534) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aaucguaccgcaaaccaacacagguuaguuauuguaaaggcuguauaaaa
ccaggauaaaggaacucggcaaaauagguuauguuuucguacaaaaccac
aacaaaaguagugacuguuuaccaaaaacacaagacucugcuaacacuua
uaguggaaguauagugucugauaccugcccaaaggcaaagcaaacggcag
cuguaacucuaacggcucuaagguagcaaaauuccauggcauuuaaauga
ugucccgcaugaaugguauaacaacuucuuaacugucucuauucuggauu
aggcgaacuuuaaaugcuugugcagaugcaggcuagcuaacaagggacga
agagacccuaugcagcuuuagggcagguuauuauucaauaaacuaccuuu
uuucugggacggacgcucuuauuaaagaaacaagagugagcaaugguuuu
uacuaauuauaaaaaagaaaagcuuaacugcaauacaaacaauuaaagca
ggggcauugucggcaauaaugcauugaagaaaua
..............<<......>>...................<<.....
<<<<<<<<.<<.........<.....<<<<.<<<......>>>.>>>>..
.....<<<.<<<<..<<<.........>>>..<<<<.<<.....<<<...
..>>>.......>>.>>>>.<<<<<.<<<.....<<...>>....>>><<
<<<<.......>>>>>>........<...........<<<<<<.....>>
>>>>.....>....>>>>>..>>.>>.>>>...>..>>.>>>>>>>>..>
>..............<<<<<........>>>>>.................
...................<<<<..<<<<<<<....>>>>.>>>.>>>>.
..<<<.....>>>.<<<<<<...........>>>>>>..<<...<<<<<<
..<.....((......>.>>>>>>...<<<<..<<........>>..>>>
>.<<<...>>>.>>.)).................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8a22 Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements.
Resolution2.91 Å
Binding residue
(original residue number in PDB)
Y63 N65
Binding residue
(residue number reindexed from 1)
Y1 N3
External links