Structure of PDB 6oxa Chain XY Binding Site BS02

Receptor Information
>6oxa Chain XY (length=84) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKLIWSEESWDDYLYWQETDKRIVKKINELIKDTRRTPFEGKGKPEPLKH
NLSGFWSRRITEEHRLVYAVTDDSLLIAACRYHY
Ligand information
>6oxa Chain XX (length=20) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
caaggagguaaaaaugaauc
....................
Receptor-Ligand Complex Structure
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PDB6oxa Monomeric YoeB toxin retains RNase activity but adopts an obligate dimeric form for thermal stability.
Resolution3.25 Å
Binding residue
(original residue number in PDB)		E46 L48 K49 N51 E62 R65 H83 Y84
Binding residue
(residue number reindexed from 1)		E46 L48 K49 N51 E62 R65 H83 Y84
Enzymatic activity
Enzyme Commision number 3.1.-.-
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
Biological Process
GO:0006401 RNA catabolic process
GO:0098795 global gene silencing by mRNA cleavage

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Molecular Function
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Biological Process
External links
PDB RCSB:6oxa, PDBe:6oxa, PDBj:6oxa
PDBsum6oxa
PubMed31501867
UniProtJ7QFC0

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