Structure of PDB 5ybd Chain X Binding Site BS02

Receptor Information
>5ybd Chain X (length=94) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPN
MNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALLEHH
Ligand information
Receptor-Ligand Complex Structure
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PDB5ybd Comparative structure analysis of the ETSi domain of ERG3 and its complex with the E74 promoter DNA sequence
Resolution2.769 Å
Binding residue
(original residue number in PDB)		Q312 L313 W351 K355 M360 D363 K364 Y371 Y372 K375
Binding residue
(residue number reindexed from 1)		Q3 L4 W42 K46 M51 D54 K55 Y62 Y63 K66
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
GO:0006357 regulation of transcription by RNA polymerase II

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Molecular Function
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Biological Process
External links
PDB RCSB:5ybd, PDBe:5ybd, PDBj:5ybd
PDBsum5ybd
PubMed30279318
UniProtP11308|ERG_HUMAN Transcriptional regulator ERG (Gene Name=ERG)

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