Structure of PDB 5lmq Chain X Binding Site BS02

Receptor Information
>5lmq Chain X (length=168) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KEYLTNERIRAKQVRVVGPDGKQLGIMDTREALRLAQEMDLDLVLVGPNA
DPPVARIMDYSKWRYEQQMAEKEARKKAKRTEVKSIKFRVKIDEHDYQTK
LGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTEDLKDLAVVEM
KPEMLGRDMNMLLAPVKV
Ligand information
>5lmq Chain Z (length=77) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cgcgggguggagcagccugguagcucgucgggcucauaacccgaaggucg
ucgguucaaauccggcccccgcaacca
.<<<<<<..<<<<.........>>>>.<<<<<.......>>>>>.....<
<<<<.......>>>>>>>>>>>.....
Receptor-Ligand Complex Structure
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PDB5lmq Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Resolution4.2 Å
Binding residue
(original residue number in PDB)		K3 Y5 R17 V19 Q25 V48 A52 D53 V56 R58
Binding residue
(residue number reindexed from 1)		K1 Y3 R15 V17 Q23 V46 A50 D51 V54 R56
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003743 translation initiation factor activity
GO:0043022 ribosome binding
Biological Process
GO:0006412 translation
GO:0006413 translational initiation
GO:0032790 ribosome disassembly
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5lmq, PDBe:5lmq, PDBj:5lmq
PDBsum5lmq
PubMed27662086
UniProtQ5SKU2|IF3_THET8 Translation initiation factor IF-3 (Gene Name=infC)

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