Structure of PDB 2h7f Chain X Binding Site BS02
Receptor Information
>2h7f Chain X (length=314) Species:
10255
(Variola virus) [
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MRALFYKDGKLFTDNNFLNPVSDNNPAYEVLQHVKIPTHLTDVVVYGQTW
EEALTRLIFVGSDSKGRRQYFYGKMHVQNRNAKRDRIFVRVYNVMKRINS
FINKNIKKSSTDSNYQLAVFMLMETMFFIRFGKMKYLKENETVGLLTLKN
KHIEISPDKIVIKFVGKDKVSHEFVVHKSNRLYKPLLKLTDDSSPEEFLF
NKLSERKVYESIKQFGIRIKDLRTYGVNYTFLYNFWTNVKSISPLPSPKK
LIALTIKQTAEVVGHTPSISKRAYMATTILEMVKDKNFLDVVSKTTFDEF
LSIVVDHVKSSTDG
Ligand information
>2h7f Chain Z (length=14) [
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taataagggcgaca
Receptor-Ligand Complex Structure
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PDB
2h7f
Structural basis for specificity in the poxvirus topoisomerase.
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
H39 R67 Q69 R130 F131 G132 K133 Y136 N140 T142 K167 D168 K220
Binding residue
(residue number reindexed from 1)
H39 R67 Q69 R130 F131 G132 K133 Y136 N140 T142 K167 D168 K220
Enzymatic activity
Catalytic site (original residue number in PDB)
R130
Catalytic site (residue number reindexed from 1)
R130
Enzyme Commision number
5.6.2.1
: DNA topoisomerase.
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003916
DNA topoisomerase activity
GO:0003917
DNA topoisomerase type I (single strand cut, ATP-independent) activity
Biological Process
GO:0006265
DNA topological change
Cellular Component
GO:0044423
virion component
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:2h7f
,
PDBe:2h7f
,
PDBj:2h7f
PDBsum
2h7f
PubMed
16885024
UniProt
P32989
|TOP1_VAR67 DNA topoisomerase 1 (Gene Name=OPG111)
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