Structure of PDB 9gd1 Chain W Binding Site BS02

Receptor Information
>9gd1 Chain W (length=849) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PTRFSNRQNKTVNYNIDYSDDDLLGIDIVINHRLLNNCKENYEFLIKWTD
ESHLHNTWETYESIGQVRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEI
MDMERERRLDEFEEFHVPERIIDSQRASLEDGTSQLQYLVKWRRLNYDEA
TWENATDIVKLAPEQVKHFQNRENSKILPQYSSNYTSQRPRFEKLSVQPP
FIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLI
FARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREY
EFYTNPKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESS
LYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFEN
QDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTE
YYKNILTKNYSALTAGFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDG
KMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGD
YLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGIN
LMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEV
LERARKKMILEYAIIDMDSIGESEVRALYKAILKFGNLKEILDELIADGT
LPVKSFEKYGETYDEMMEAAKDCVHEEEKNRKVLFNFKGVKSLNAESLLS
RVEDLKYLKNLINSNYKDDPLKFSLGNNTPKPVQNWSSNWTKEEDEKLLI
GVFKYGYGSWTQIRDDPFLGITDKIFLKKVPGAIHLGRRVDYLLSFLRG
Ligand information
>9gd1 Chain J (length=259) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggccgctctagaacaggatgtatatatctgacacgtgcctggagactagg
gagtaatccccttggcggttaaaacgcgggggacagcgcgtacgtgcgtt
taagcggtgctagagctgtctacgaccaattgaggaattccctggagact
agggagtaatccccttggcggttaaaacgcgggggacagcgcgtacgtgc
gtttaagcggtgctagagctgtctacgaccaattgagcggcctcggcacc
gggattctc
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9gd1 Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT.
Resolution4.0 Å
Binding residue
(original residue number in PDB)		R241 R517 K519 S523 S524 R563 R772 W793 N794 R832 R1016 H1252 R1255
Binding residue
(residue number reindexed from 1)		R72 R343 K345 S349 S350 R389 R593 W614 N615 R653 R676 H835 R838
External links
PDB RCSB:9gd1, PDBe:9gd1, PDBj:9gd1
PDBsum9gd1
PubMed39270644
UniProtP32657|CHD1_YEAST Chromo domain-containing protein 1 (Gene Name=CHD1)

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