Structure of PDB 7nar Chain W Binding Site BS02
Receptor Information
>7nar Chain W (length=314) Species:
83333
(Escherichia coli K-12) [
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NLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRP
GKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAIL
PELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNI
GYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKE
ILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQI
TQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRIL
ESMAQVKTRKNFSD
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
7nar Chain W Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
7nar
A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Resolution
3.0 Å
Binding residue
(original residue number in PDB)
C297 H304 C310
Binding residue
(residue number reindexed from 1)
C264 H271 C277
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.6.1.-
Gene Ontology
Molecular Function
GO:0003924
GTPase activity
GO:0005515
protein binding
GO:0005525
GTP binding
GO:0016787
hydrolase activity
GO:0019003
GDP binding
GO:0019843
rRNA binding
GO:0046872
metal ion binding
GO:0097216
guanosine tetraphosphate binding
Biological Process
GO:0000028
ribosomal small subunit assembly
GO:0042254
ribosome biogenesis
GO:0042274
ribosomal small subunit biogenesis
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:7nar
,
PDBe:7nar
,
PDBj:7nar
PDBsum
7nar
PubMed
34088665
UniProt
P39286
|RSGA_ECOLI Small ribosomal subunit biogenesis GTPase RsgA (Gene Name=rsgA)
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