Structure of PDB 7amv Chain W Binding Site BS02

Receptor Information
>7amv Chain W (length=637) Species: 502057 (Vaccinia virus GLV-1h68) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MNTGIIDLFDNHVDSIPTILPHQLATLDYLVRTIIDENRSVLLFHIMGSG
KTIIALLFALVASRFKKVYILVPNINILKIFNYNMGVAMNLFNDEFIAEN
IFIHSTTSFYSLNYNDNVINYNGLSRYNNSIFIVDEAHNIFGNNTGELMT
VIKNKNKIPFLLLSGSPITNTPNTLGHIIDLMSEETIDFGEIISRGKKVI
QTLLNERGVNVLKDLLKGRISYYEMPDKDLPTIRYHGRKFLDTRVVYCHM
SKLQERDYMITRRQLCYHEMFDKNMYNVSMAVLGQLNLMNNLDTLFQEQD
KELYPNLKINNGVLYGEELVTLNISSKFKYFINRIQTLNGKHFIYFSNST
YGGLVIKYIMLSNGYSEYNGSQGTNPHMINGKPKTFAIVTSKMKSSLEDL
LDVYNSPENDDGSQLMFLFSSNIMSESYTLKEVRHIWFMTIPDTFSQYNQ
ILGRSIRKFSYADISEPVNVYLLAAVYSDFNDEVTSLNDYTQDELINVLP
FDIKKLLYLKFKTKETNRIYSILQEMSETYSLPPHPSIVKVLLGELVRQF
FYNNSRIKYNDTKLLKMVTSVIKNKEDARNYIDDIVNGHFFVSNKVFDKS
LLYKYENDIITVPFRLSYEPFVWGVNFRKEYNVVSSP
Ligand information
>7amv Chain T (length=42) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ccccaagtgggttatggataatagtttttcaatttttaagct
Receptor-Ligand Complex Structure
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PDB7amv Structural basis of the complete poxvirus transcription initiation process.
Resolution2.8 Å
Binding residue
(original residue number in PDB)
N74 I75 S105 T107 E191 R195 Y267 F271 K273 N290 L292 S349 T350 S391 S421 I423 M424
Binding residue
(residue number reindexed from 1)
N74 I75 S105 T107 E191 R195 Y267 F271 K273 N290 L292 S349 T350 S391 S421 I423 M424
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
Cellular Component
GO:0016020 membrane
GO:0044423 virion component

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:7amv, PDBe:7amv, PDBj:7amv
PDBsum7amv
PubMed34556871
UniProtQ49QE8

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