Structure of PDB 5cc1 Chain W Binding Site BS02

Receptor Information

>5cc1 Chain W (length=75) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

PPKLCLVCGDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIID
KIRRKNCPACRYRKCLQAGMNLEAR

Ligand information

>5cc1 Chain Z (length=18) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

ccagaacagagtgttctg

Receptor-Ligand Complex Structure

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PDB	5cc1 Distal substitutions drive divergent DNA specificity among paralogous transcription factors through subdivision of conformational space.
Resolution	2.302 Å
Binding residue (original residue number in PDB)	C431 H432 Y433 K442 K446
Binding residue (residue number reindexed from 1)	C15 H16 Y17 K26 K30
Binding affinity	PDBbind-CN: Kd=0.085uM

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003700	DNA-binding transcription factor activity
GO:0008270	zinc ion binding
GO:0043565	sequence-specific DNA binding

	Biological Process
GO:0006355	regulation of DNA-templated transcription

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Molecular Function

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Biological Process

External links

PDB	RCSB:5cc1, PDBe:5cc1, PDBj:5cc1
PDBsum	5cc1
PubMed	26715749
UniProt	P04150\|GCR_HUMAN Glucocorticoid receptor (Gene Name=NR3C1)

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