Structure of PDB 6rxy Chain UR Binding Site BS02

Receptor Information
>6rxy Chain UR (length=447) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AEKDAEEEELEKFVLGAKETFREQLFRDAPAWEDSDDERLTISLAGATRL
RKLRISESEDLVSGIEYARRLRQQYLRLYPQPDWAKPLPLDSFLRDANSF
KVRRKLRPETIDIQRTRDIPDTHKAAISSLAFHPRYPILLSSSTSSIMYL
HKLDASAYPTPNPLLTSVHVKRTDLRRAAFVGPDGGEIIFAGRRRYFHCW
NLSSGLVKKVSKIQGHQKEQRTMERFRVSPCGRYMALVASDKKGGGMLNI
INVGTMQWIAQARIDGRHGVADFAWWSDGNGLTIAGRDGQVTEWSMITRR
TVGIWRDEGSIGGTVMALGGRNGPAELGGDRWVAIGSNSGILNVYDRNDL
IEIRIKKYPTPTRVFEQLTTSISVVAFSPDGQLLAFGSQHKKDALRLVHL
PSCTVYRNWPTEQTPLGRVTAIAFSSKSDVLAVGNDVGRVRLWEIRG
Ligand information
>6rxy Chain C2 (length=230) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
agcgacaauacuucagagaaucauuucuauaguaguuguccucucuugug
uuuccuaaaggagccacagaucccacccggguugaugaacgagauccucg
gcgccagugagguccauuuacucucgcucuaccugcaaagguggcggucg
cgugccucgucucgcggcuguauagagaguggcgaugaucuguaccccgc
ggggugggugucgauggaagucugaccggc
..................................................
..........................<<<<..............<<<<<<
<<<<.<<............<<<<<<...<<<<<......>>>>><<<<<<
<<.<......>.>>>>>>>>....>>>>>>.........>>.<<<<<<..
>>>>>>.>>>>>>>.>>>.......>>>>.
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6rxy Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration.
Resolution4.7 Å
Binding residue
(original residue number in PDB)		Q538 R567 Y577 R578
Binding residue
(residue number reindexed from 1)		Q367 R396 Y406 R407
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0006364 rRNA processing
Cellular Component
GO:0005730 nucleolus
GO:0032040 small-subunit processome
GO:0034388 Pwp2p-containing subcomplex of 90S preribosome

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6rxy, PDBe:6rxy, PDBj:6rxy
PDBsum6rxy
PubMed31378463
UniProtG0SBN9

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