Structure of PDB 6rxt Chain UF Binding Site BS02

Receptor Information
>6rxt Chain UF (length=331) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AWVADKARFYLERAAPELREWEEKEIFTKDEIRNLVAKRSDFEHLVLAPG
TKPTDFLNYVNWERSLDRLRAKRCARLNIRSVTSHASQARTFGIFERAVL
KHPGSIELWLAYLEFAAQVKATKRWRRIMTRALRLHPMNASLWTLAGRRA
AQNGDMQRARAHFLRGCRFCTREPTLWLEYARCEMDWLARMEAKKPALSG
AIPIAVFDVARKQPFWGPAAAEKFFDVFAKFGHLSCHERIISHVVTTMQE
LFPNHPCTWSVHIRQPLVGVDTPAFPKALRESLARLKAALQSTTDRKALA
TKMVAWMDGILAIEKLDAAIRTVLEHTKRSL
Ligand information
>6rxt Chain C2 (length=230) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
agcgacaauacuucagagaaucauuucuauaguaguuguccucucuugug
uuuccuaaaggagccacagaucccacccggguugaugaacgagauccucg
gcgccagugagguccauuuacucucgcucuaccugcaaagguggcggucg
cgugccucgucucgcggcuguauagagaguggcgaugaucuguaccccgc
ggggugggugucgauggaagucugaccggc
..................................................
..........................<<<<......<.......<<<<<<
<<<<.<<............<<<<<<...<<<<<<....>>>>>><<<<<<
<<.<......>.>>>>>>>>....>>>>>>.........>>.<<<<<<..
>>>>>>.>>>>>>>.>>>...>...>>>>.
Receptor-Ligand Complex Structure
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PDB6rxt Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration.
Resolution7.0 Å
Binding residue
(original residue number in PDB)		A2 W3
Binding residue
(residue number reindexed from 1)		A1 W2
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006396 RNA processing
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0032040 small-subunit processome
GO:0034388 Pwp2p-containing subcomplex of 90S preribosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6rxt, PDBe:6rxt, PDBj:6rxt
PDBsum6rxt
PubMed31378463
UniProtG0S387

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