Structure of PDB 6boh Chain UB Binding Site BS02

Receptor Information
>6boh Chain UB (length=110) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RLTAYERRKFRVRNRIKRTGRLRLSVFRSLKHIYAQIIDDEKGVTLVSAS
SLALKLKGNKTEVARQVGRALAEKALALGIKQVAFDRGPYKYHGRVKALA
EGAREGGLEF
Ligand information
>6boh Chain HB (length=120) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ucccccgugcccauagcggcguggaaccacccguucccauuccgaacacg
gaagugaaacgcgccagcgccgaugguacugggcgggcgaccgccuggga
gaguaggucggugcggggga
.<<<<<<<<<.....<<<<<<<<....<<<<<<...............>>
>..>>>...>>>>>>.>><<<.......<<<<<<<<....>>>>>>>>..
.....>>>..>>>>>>>>>.
Receptor-Ligand Complex Structure
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PDB6boh Conformational Control of Translation Termination on the 70S Ribosome.
Resolution3.4 Å
Binding residue
(original residue number in PDB)		R10 R15 K19 R25 F29 S31 L32 K33 Y36 V46 T47 S50 L54 A55 N61 K62 T63 Y92 K93 H95 G96 R97
Binding residue
(residue number reindexed from 1)		R8 R13 K17 R23 F27 S29 L30 K31 Y34 V44 T45 S48 L52 A53 N59 K60 T61 Y90 K91 H93 G94 R95
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:6boh, PDBe:6boh, PDBj:6boh
PDBsum6boh
PubMed29731232
UniProtQ72I20|RL18_THET2 Large ribosomal subunit protein uL18 (Gene Name=rplR)

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