Structure of PDB 6nd4 Chain U Binding Site BS02

Receptor Information
>6nd4 Chain U (length=407) Species: 1247190 (Saccharomyces cerevisiae BY4741) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKIKTIKRSADDYVPVKSTQESQMPRNLNPELHPFERAREYTKALNATKL
ERMFAKPFVGQLGYGHRDGVYAIAKNYGSLNKLATGSADGVIKYWNMSTR
EEFVSFKAHYGLVTGLCVTQNFMLSCSDDKTVKLWSINEGLIRTFDGESA
FQGIDSHRENSTFATGGAKIHLWDVNRLKPVSDLSWGADNITSLKFNQNE
TDILASTGSDNSIVLYDLRTNSPTQKIVQTMRTNAICWNPMEAFNFVTAN
EDHNAYYYDMRNLSRSLNVFKDHVSAVMDVDFSPTGDEIVTGSYDKSIRI
YKTNHGHSREIYHTKRMQHVFQVKYSMDSKYIISGSDDGNVRLWRSKAWE
RSNVKTTREKNKLEYDEKLKERFRHMPEIKRISRHRHVPQVIKKAQEIKN
IELSSIK
Ligand information
Receptor-Ligand Complex Structure
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PDB6nd4 Conformational switches control early maturation of the eukaryotic small ribosomal subunit.
Resolution4.3 Å
Binding residue
(original residue number in PDB)		R415 H416 R417
Binding residue
(residue number reindexed from 1)		R384 H385 R386
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006364 rRNA processing
GO:0030490 maturation of SSU-rRNA
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0030686 90S preribosome
GO:0032040 small-subunit processome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6nd4, PDBe:6nd4, PDBj:6nd4
PDBsum6nd4
PubMed31206356
UniProtP33750|DCA13_YEAST Protein SOF1 (Gene Name=SOF1)

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