Structure of PDB 6l4a Chain U Binding Site BS02

Receptor Information
>6l4a Chain U (length=103) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILEL
AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVL
LPK
Ligand information
>6l4a Chain J (length=485) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
atcgatgtatatatctgacacgtgcctggagactagggagtaatcccctt
ggcggttaaaacgcgggggacagcgcgtacgtgcgtttaagcggtgctag
agctgtctacgaccaattgagcggcctcggcaccgggattctgattatcc
aggccgttggggcctatccaatcgatgtatatatctgacacgtgcctgga
gactagggagtaatccccttggcggttaaaacgcgggggacagcgcgtac
gtgcgtttaagcggtgctagagctgtctacgaccaattgagcggcctcgg
caccgggattctgattatccaggccgtccgggcctatccaatcgatgtat
atatctgacacgtgcctggagactagggagtaatccccttggcggttaaa
acgcgggggacagcgcgtacgtgcgtttaagcggtgctagagctgtctac
gaccaattgagcggcctcggcaccgggattctgat
Receptor-Ligand Complex Structure
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PDB6l4a Cryo-EM Structures of Centromeric Tri-nucleosomes Containing a Central CENP-A Nucleosome.
Resolution12.3 Å
Binding residue
(original residue number in PDB)		R29 R35 R42 V43 G44 A45 K75 T76 R77
Binding residue
(residue number reindexed from 1)		R14 R20 R27 V28 G29 A30 K60 T61 R62
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0031492 nucleosomal DNA binding
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006325 chromatin organization
GO:0008285 negative regulation of cell population proliferation
GO:0031507 heterochromatin formation
GO:0061644 protein localization to CENP-A containing chromatin
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome
GO:0043505 CENP-A containing nucleosome
GO:0070062 extracellular exosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6l4a, PDBe:6l4a, PDBj:6l4a
PDBsum6l4a
PubMed31711756
UniProtP04908|H2A1B_HUMAN Histone H2A type 1-B/E (Gene Name=H2AC4)

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